Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
| Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
| Upregulated in class | BT_ATM_minus |
| GeneSet | BIOCARTA_FMLP INDUCED CHEMOKINE GENE EXPRESSION IN HMC-1 CELLS |
| Enrichment Score (ES) | -0.5489596 |
| Normalized Enrichment Score (NES) | -1.7255744 |
| Nominal p-value | 0.0076045627 |
| FDR q-value | 0.12776083 |
| FWER p-Value | 0.931 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PPP3CC | 1420743_a_at 1430025_at | 408 | 4.146 | 0.0534 | No | ||
| 2 | GNGT1 | 1425167_a_at 1425168_at 1425219_x_at 1451633_a_at | 733 | 3.365 | 0.0970 | No | ||
| 3 | RAC1 | 1423734_at 1437674_at 1451086_s_at | 3186 | 1.669 | 0.0141 | No | ||
| 4 | PPP3CA | 1426401_at 1438478_a_at 1440051_at 1452056_s_at 1458495_at | 4066 | 1.403 | -0.0017 | No | ||
| 5 | CAMKK2 | 1424474_a_at 1424475_at 1424476_at 1455401_at | 4357 | 1.326 | 0.0081 | No | ||
| 6 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 5266 | 1.113 | -0.0140 | No | ||
| 7 | MAP2K1 | 1416351_at | 6572 | 0.873 | -0.0585 | No | ||
| 8 | FPR1 | 1450808_at | 6948 | 0.808 | -0.0615 | No | ||
| 9 | MAP2K2 | 1415974_at 1443436_at 1460636_at | 7957 | 0.639 | -0.0965 | No | ||
| 10 | PRKCA | 1427562_a_at 1443069_at 1445028_at 1445395_at 1446598_at 1450945_at | 8221 | 0.595 | -0.0981 | No | ||
| 11 | MAPK14 | 1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at | 9589 | 0.387 | -0.1538 | No | ||
| 12 | PPP3CB | 1427468_at 1428473_at 1428474_at 1433835_at 1446149_at 1459378_at | 11587 | 0.080 | -0.2436 | No | ||
| 13 | GNA15 | 1421302_a_at | 12193 | -0.015 | -0.2709 | No | ||
| 14 | HRAS | 1422407_s_at 1424132_at | 12431 | -0.057 | -0.2808 | No | ||
| 15 | NCF2 | 1448561_at | 12671 | -0.102 | -0.2899 | No | ||
| 16 | GNB1 | 1417432_a_at 1425908_at 1454696_at 1459442_at | 12974 | -0.152 | -0.3011 | No | ||
| 17 | PLCB1 | 1421170_a_at 1425600_a_at 1425781_a_at 1425782_at 1435043_at 1447004_at | 13625 | -0.264 | -0.3261 | No | ||
| 18 | MAP2K3 | 1425456_a_at 1451714_a_at | 15187 | -0.559 | -0.3877 | No | ||
| 19 | PIK3C2G | 1421704_a_at | 15223 | -0.568 | -0.3794 | No | ||
| 20 | PAK1 | 1420979_at 1420980_at 1450070_s_at 1459029_at | 15927 | -0.720 | -0.3990 | No | ||
| 21 | ELK1 | 1421896_at 1421897_at 1446390_at | 18520 | -1.412 | -0.4928 | No | ||
| 22 | MAPK1 | 1419568_at 1426585_s_at 1442876_at 1453104_at | 19751 | -2.036 | -0.5136 | Yes | ||
| 23 | CAMK2B | 1448676_at 1455869_at | 20302 | -2.499 | -0.4953 | Yes | ||
| 24 | RELA | 1419536_a_at | 20889 | -3.265 | -0.4654 | Yes | ||
| 25 | MAPK3 | 1427060_at | 20984 | -3.442 | -0.4099 | Yes | ||
| 26 | RAF1 | 1416078_s_at 1425419_a_at | 21451 | -4.510 | -0.3528 | Yes | ||
| 27 | MAP2K6 | 1426850_a_at 1459292_at | 21619 | -5.264 | -0.2690 | Yes | ||
| 28 | CAMKK1 | 1418954_at | 21722 | -6.092 | -0.1679 | Yes | ||
| 29 | NFATC1 | 1417621_at 1425761_a_at 1428479_at 1447084_at 1447085_s_at | 21917 | -10.221 | 0.0008 | Yes |
